User profiles for E. Krieger

Eric V. Krieger

University of Washington
Verified email at u.washington.edu
Cited by 6973

Homology modeling

E Krieger, SB Nabuurs, G Vriend - Structural bioinformatics, 2003 - Wiley Online Library
The ultimate goal of protein modeling is to predict a structure from its sequence with an
accuracy that is comparable to the best results achieved experimentally. This would allow users …

Diagnosis and management of noncardiac complications in adults with congenital heart disease: a scientific statement from the American Heart Association

…, J Ginns, JD Kay, YY Kim, AH Kovacs, EV Krieger… - Circulation, 2017 - Am Heart Assoc
Life expectancy and quality of life for those born with congenital heart disease (CHD) have
greatly improved over the past 3 decades. While representing a great advance for these …

Maternal and fetal outcomes of anticoagulation in pregnant women with mechanical heart valves

…, CM Otto, KK Stout, EV Krieger - Journal of the American …, 2017 - jacc.org
Background : Anticoagulation for mechanical heart valves during pregnancy is essential to
prevent thromboembolic events. Each regimen has drawbacks with regard to maternal or fetal …

2020 ACC/AHA guideline for the management of patients with valvular heart disease: a report of the American College of Cardiology/American Heart Association Joint …

…, JP Erwin III, F Gentile, H Jneid, EV Krieger… - Journal of the American …, 2021 - jacc.org
The recommendations listed in this document are, whenever possible, evidence based. An
extensive review was conducted on literature published through March 1, 2020. Searches …

Mutations in the DJ-1 Gene Associated with Autosomal Recessive Early-Onset Parkinsonism

…, MJ Van Baren, O Schaap, GJ Breedveld, E Krieger… - Science, 2003 - science.org
The DJ-1 gene encodes a ubiquitous, highly conserved protein. Here, we show that DJ-1
mutations are associated with PARK7, a monogenic form of human parkinsonism. The function …

2020 ACC/AHA guideline for the management of patients with valvular heart disease: executive summary: a report of the American College of Cardiology/American …

…, JP Erwin III, F Gentile, H Jneid, EV Krieger… - Journal of the American …, 2021 - jacc.org
Aim This executive summary of the valvular heart disease guideline provides recommendations
for clinicians to diagnose and manage valvular heart disease as well as supporting …

Increasing the precision of comparative models with YASARA NOVA—a self‐parameterizing force field

E Krieger, G Koraimann… - … : Structure, Function, and …, 2002 - Wiley Online Library
One of the conclusions drawn at the CASP4 meeting in Asilomar was that applying various
force fields during refinement of template‐based models tends to move predictions in the …

Improving physical realism, stereochemistry, and side‐chain accuracy in homology modeling: Four approaches that performed well in CASP8

E Krieger, K Joo, J Lee, J Lee, S Raman… - Proteins: Structure …, 2009 - Wiley Online Library
A correct alignment is an essential requirement in homology modeling. Yet in order to
bridge the structural gap between template and target, which may not only involve loop …

YASARA View—molecular graphics for all devices—from smartphones to workstations

E Krieger, G Vriend - Bioinformatics, 2014 - academic.oup.com
Today's graphics processing units (GPUs) compose the scene from individual triangles. As
about 320 triangles are needed to approximate a single sphere—an atom—in a convincing …

Making optimal use of empirical energy functions: force‐field parameterization in crystal space

E Krieger, T Darden, SB Nabuurs… - Proteins: Structure …, 2004 - Wiley Online Library
… In addition to a hydrogen-bonding network optimizer,18 a new method for pKa prediction in
protein crystals was required to assign the protonation states of ionizable groups (Krieger et …