User profiles for Philip Awadalla
Philip AwadallaProfessor, Ontario Institute for Cancer Research, University of Toronto Verified email at utoronto.ca Cited by 73371 |
[HTML][HTML] Genomic basis for RNA alterations in cancer
Transcript alterations often result from somatic changes in cancer genomes 1 . Various forms
of RNA alterations have been described in cancer, including overexpression 2 , altered …
of RNA alterations have been described in cancer, including overexpression 2 , altered …
Linkage disequilibrium and recombination in hominid mitochondrial DNA
P Awadalla, A Eyre-Walker, JM Smith - Science, 1999 - science.org
The assumption that human mitochondrial DNA is inherited from one parent only and therefore
does not recombine is questionable. Linkage disequilibrium in human and chimpanzee …
does not recombine is questionable. Linkage disequilibrium in human and chimpanzee …
A coalescent-based method for detecting and estimating recombination from gene sequences
Determining the amount of recombination in the genealogical history of a sample of genes is
important to both evolutionary biology and medical population genetics. However, recurrent …
important to both evolutionary biology and medical population genetics. However, recurrent …
Allele-specific expression reveals interactions between genetic variation and environment
Identifying interactions between genetics and the environment (GxE) remains challenging.
We have developed EAGLE, a hierarchical Bayesian model for identifying GxE interactions …
We have developed EAGLE, a hierarchical Bayesian model for identifying GxE interactions …
Large-scale cis- and trans-eQTL analyses identify thousands of genetic loci and polygenic scores that regulate blood gene expression
Trait-associated genetic variants affect complex phenotypes primarily via regulatory mechanisms
on the transcriptome. To investigate the genetics of gene expression, we performed cis…
on the transcriptome. To investigate the genetics of gene expression, we performed cis…
Prediction of acute myeloid leukaemia risk in healthy individuals
…, D Pasternack, L Timms, P Krzyzanowski, P Awadalla… - Nature, 2018 - nature.com
The incidence of acute myeloid leukaemia (AML) increases with age and mortality exceeds
90% when diagnosed after age 65. Most cases arise without any detectable early symptoms …
90% when diagnosed after age 65. Most cases arise without any detectable early symptoms …
Lung adenocarcinoma promotion by air pollutants
A complete understanding of how exposure to environmental substances promotes cancer
formation is lacking. More than 70 years ago, tumorigenesis was proposed to occur in a two-…
formation is lacking. More than 70 years ago, tumorigenesis was proposed to occur in a two-…
De novo mutations in the gene encoding the synaptic scaffolding protein SHANK3 in patients ascertained for schizophrenia
…, C Marineau, EA Stone, P Awadalla… - Proceedings of the …, 2010 - National Acad Sciences
Schizophrenia likely results from poorly understood genetic and environmental factors. We
studied the gene encoding the synaptic protein SHANK3 in 285 controls and 185 …
studied the gene encoding the synaptic protein SHANK3 in 285 controls and 185 …
Unraveling the polygenic architecture of complex traits using blood eQTL metaanalysis
While many disease-associated variants have been identified through genome-wide association
studies, their downstream molecular consequences remain unclear. To identify these …
studies, their downstream molecular consequences remain unclear. To identify these …
[PDF][PDF] Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease
Biobanks facilitate genome-wide association studies (GWASs), which have mapped genomic
loci across a range of human diseases and traits. However, most biobanks are primarily …
loci across a range of human diseases and traits. However, most biobanks are primarily …